Package: ecodist 2.1.3

Sarah Goslee

ecodist: Dissimilarity-Based Functions for Ecological Analysis

Dissimilarity-based analysis functions including ordination and Mantel test functions, intended for use with spatial and community ecological data. The original package description is in Goslee and Urban (2007) <doi:10.18637/jss.v022.i07>, with further statistical detail in Goslee (2010) <doi:10.1007/s11258-009-9641-0>.

Authors:Sarah Goslee [aut, cre], Dean Urban [aut]

ecodist_2.1.3.tar.gz
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ecodist.pdf |ecodist.html✨
ecodist/json (API)

# Install 'ecodist' in R:
install.packages('ecodist', repos = c('https://phiala.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/phiala/ecodist/issues

Uses libs:
  • openblas– Optimized BLAS
Datasets:
  • bump - Nine-bump spatial pattern
  • bump.pmgram - Nine-bump spatial pattern
  • graze - Site information and grazed vegetation data.
  • iris.fit - Example of adding to an ordination
  • iris.nmds - Example for nmds
  • iris.vf - Example for vector fitting on ordination
  • iris.vfrot - Example for vector fitting on rotated ordination
  • z.no - Example for pmgram
  • z.z1 - Example for pmgram

On CRAN:

9.64 score 8 stars 9 packages 540 scripts 3.8k downloads 205 mentions 29 exports 11 dependencies

Last updated 1 years agofrom:aeac585427. Checks:OK: 9. Indexed: yes.

TargetResultDate
Doc / VignettesOKOct 08 2024
R-4.5-win-x86_64OKOct 08 2024
R-4.5-linux-x86_64OKOct 08 2024
R-4.4-win-x86_64OKOct 08 2024
R-4.4-mac-x86_64OKOct 08 2024
R-4.4-mac-aarch64OKOct 08 2024
R-4.3-win-x86_64OKOct 08 2024
R-4.3-mac-x86_64OKOct 08 2024
R-4.3-mac-aarch64OKOct 08 2024

Exports:addordbcdistcor2mcorgencrosstabdistancefixdmatfulllowermantelmgrammgroupmin.nmdsMRMnmdsnmds.minpathdistpcoplot.mgramplot.nmdsplot.vfpmgramrelrangeresiduals.mgramrotate2dvfxdistancexmantelxmgram

Dependencies:clicpp11glueigraphlatticelifecyclemagrittrMatrixpkgconfigrlangvctrs

Dissimilarity Cheat Sheet

Sarah Goslee

Rendered fromdissimilarity.Rmdusingknitr::rmarkdownon Oct 08 2024.

Last update: 2023-08-04
Started: 2017-07-07